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DNA Traits · Immune biology

White blood cell count association

The number of white blood cells, the cells of the immune system, in the blood.

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Evidence · Replicated

What the research found

In the cited research, the A allele at rs2517524 was associated with higher total white blood cell counts in the studied cohorts.

CC
Lower average
AC
Middle
AA
Higher average
Evidence
Genome-wide association with independent replication
Who was studied
European-ancestry discovery and independent replication cohorts
1000 Genomes Project

How common each genotype is

How common each genotype is in the 1000 Genomes Project, by region
RegionCCLower averageACMiddleAAHigher average
All regions2,504 people14%43%43%
Africa661 people9%41%50%
The Americas347 people16%50%35%
East Asia504 people14%42%44%
Europe503 people22%48%29%
South Asia489 people9%38%53%

Among the 2,504 people of the 1000 Genomes Project, in five world regions. These percentages describe groups of people, never anyone’s chance of having a trait.

rs2517524

The marker

Gene or region
HLA / MUC21 region
Marker
rs2517524
Location
Chromosome 6 · GRCh37 31,025,713 · GRCh38 31,057,936
Letters studied
A and C, with A as the studied allele

A DNA Traits report reads this marker in your raw DNA file and shows which of the three genotypes is yours, with how common it is. It counts the copies of the studied allele; it does not measure the trait itself.

Marker
HLA / MUC21 region · rs2517524
Location
Chromosome 6 · GRCh37 31,025,713 · GRCh38 31,057,936
Studied allele
A
Published statistic
Joint beta +0.013 per A allele on natural-log WBC count (SE 0.002), P 1.46e-12; discovery +0.017 (SE 0.003), P 2.64e-9; independent replication +0.011 (SE 0.003), P 2.50e-5 (Table 2) (Table 2, total white blood cell count row; Methods (transformation))
1000 Genomes Project phase 3, people with 0, 1 and 2 copies
All regions 343 / 1082 / 1079 · Africa 61 / 270 / 330 · The Americas 55 / 172 / 120 · East Asia 70 / 212 / 222 · Europe 113 / 243 / 147 · South Asia 44 / 185 / 260
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Limits

What it cannot tell you

This small association is with a laboratory blood-cell count within the normal range studied. It does not estimate your current count, grade immune strength or predict infection, allergy, autoimmune disease or blood cancer. Only the studied A/C allele pair is interpreted.

Multiple Loci Are Associated with White Blood Cell Phenotypes (Nalls et al., 2011)
The same topic

More in Immune biology

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