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DNA Traits · Reproductive biology

DHT research association in older men

The blood level of DHT, a hormone the body makes from testosterone, in older men.

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Evidence · Not yet replicated

What the research found

In the cited research, the T allele at rs727428 was associated with lower circulating dihydrotestosterone (DHT) concentrations in the studied older men.

CC
Higher average
CT
Middle
TT
Lower average
Modest effect
Evidence
Discovery GWAS with within-trial subgroup consistency
Who was studied
European-ancestry men aged 50 to 75 in REDUCE, enrolled with elevated PSA and a negative prostate biopsy

The research behind this card was done only in men, so it is part of a report requested as male.

1000 Genomes Project

How common each genotype is

How common each genotype is in the 1000 Genomes Project, by region
RegionCCHigher averageCTMiddleTTLower average
All regions2,504 people28%47%25%
Africa661 people24%49%27%
The Americas347 people43%45%12%
East Asia504 people32%47%21%
Europe503 people35%45%20%
South Asia489 people13%47%40%

Among the 2,504 people of the 1000 Genomes Project, in five world regions. These percentages describe groups of people, never anyone’s chance of having a trait.

Ancient genomes

Through time

How often the studied letter was read in ancient people, era by era, in the region chosen.

Region
Through time: Europe
Before farmingbefore 6500 BC44%27 of 62 copies read
First farmers6500 to 3000 BC38%368 of 959 copies read
Bronze Age3000 to 1200 BC43%387 of 898 copies read
Iron Age and Antiquity1200 BC to AD 60041%445 of 1,093 copies read
Middle AgesAD 600 to 150039%223 of 566 copies read
Today1000 Genomes43%430 of 1,006 copies

Neanderthal and Denisovan genomes

Altai Neanderthal
2 copies
Vindija Neanderthal
2 copies
Chagyrskaya Neanderthal
2 copies
Denisovan
2 copies

Neanderthals and Denisovans carried this letter too: it is the older of the two.

For most ancient people only one of their two copies can be read, so these counts are copies read, not people. Close relatives, repeated samples and samples the archive marks as unreliable are left out. Damage in old DNA can fake this letter, so it is counted only from samples treated to remove that damage and from high-quality genomes. Ancient genomes from the Allen Ancient DNA Resource (AADR v66): 15,136 people.
rs727428

The marker

Gene or region
SHBG region
Marker
rs727428
Location
Chromosome 17 · GRCh37 7,537,792 · GRCh38 7,634,474
Letters studied
C and T, with T as the studied allele

A DNA Traits report reads this marker in your raw DNA file and shows which of the three genotypes is yours, with how common it is. It counts the copies of the studied allele; it does not measure the trait itself.

Marker
SHBG region · rs727428
Location
Chromosome 17 · GRCh37 7,537,792 · GRCh38 7,634,474
Studied allele
T
Published statistic
beta -0.103 per T allele on log-transformed serum DHT (SE 0.015), P 1.47e-11, partial R2 0.013, N 3,225 (Table 1) (Table 1, rs727428 row)
1000 Genomes Project phase 3, people with 0, 1 and 2 copies
All regions 702 / 1179 / 623 · Africa 156 / 327 / 178 · The Americas 149 / 156 / 42 · East Asia 159 / 237 / 108 · Europe 174 / 228 / 101 · South Asia 64 / 231 / 194
Limits

What it cannot tell you

This association was observed in a selected cohort of older men and explained about 1.3% of serum DHT variation in that study. Validation used two groups within the same trial, not an independent population. This card shares its SHBG-region marker with the SHBG association card, so the two are not independent genetic findings. It does not estimate your current DHT, tissue DHT or SRD5A2 enzyme activity, predict fertility or penis size, or guide hormone treatment. Only the studied C/T allele pair is interpreted. No independent replication of this exact DHT association was found.

Genome-wide association study identifies a new locus JMJD1C at 10q21 that may influence serum androgen levels in men (Jin et al., 2012)
The same topic

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