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DNA Traits · Reproductive biology

FSH regulation association in men

The blood level of FSH, a hormone that acts on the testes, in men.

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Evidence · Replicated

What the research found

In the cited research, the T allele at rs10835638 was associated with lower follicle-stimulating hormone (FSH) concentrations in the studied male cohorts.

GG
Higher average
GT
Middle
TT
Lower average
Modest effect

What the study found

In the study, the average FSH in blood, by genotype:

GGNo copy
3.2 IU/L
GTOne copy
2.7 IU/L
TTTwo copies
2.4 IU/L
Young men from the general population in Estonia, Latvia and Lithuania (median age 19.8) · 1,054 people · Table 2, FSH (IU/liter) mean (sd) row; Results
Evidence
Replicated candidate-variant association with promoter-function evidence
Who was studied
Young men from Estonia, Latvia and Lithuania; earlier Estonian male cohorts

The research behind this card was done only in men, so it is part of a report requested as male.

1000 Genomes Project

How common each genotype is

How common each genotype is in the 1000 Genomes Project, by region
RegionGGHigher averageGTMiddleTTLower average
All regions2,504 people84%15%<1%
Africa661 people91%9%<1%
The Americas347 people79%19%2%
East Asia504 people94%6%Not seen
Europe503 people73%25%2%
South Asia489 people80%19%1%

Among the 2,504 people of the 1000 Genomes Project, in five world regions. These percentages describe groups of people, never anyone’s chance of having a trait.

Ancient genomes

Through time

How often the studied letter was read in ancient people, era by era, in the region chosen.

Region
Through time: Europe
Before farmingbefore 6500 BC33%16 of 48 copies read
First farmers6500 to 3000 BC18%62 of 348 copies read
Bronze Age3000 to 1200 BC13%37 of 275 copies read
Iron Age and Antiquity1200 BC to AD 60013%85 of 672 copies read
Middle AgesAD 600 to 150016%133 of 842 copies read
Today1000 Genomes14%144 of 1,006 copies

Neanderthal and Denisovan genomes

Altai Neanderthal
No copies
Vindija Neanderthal
Not read
Chagyrskaya Neanderthal
Not read
Denisovan
No copies

Neanderthals and Denisovans carried the other letter, so this letter is younger than our split with them.

For most ancient people only one of their two copies can be read, so these counts are copies read, not people. Close relatives, repeated samples and samples the archive marks as unreliable are left out. Ancient genomes from the Allen Ancient DNA Resource (AADR v66): 15,136 people.
rs10835638

The marker

Gene or region
FSHB promoter
Marker
rs10835638
Location
Chromosome 11 · GRCh37 30,252,352 · GRCh38 30,230,805
Letters studied
G and T, with T as the studied allele

A DNA Traits report reads this marker in your raw DNA file and shows which of the three genotypes is yours, with how common it is. It counts the copies of the studied allele; it does not measure the trait itself.

Marker
FSHB promoter · rs10835638
Location
Chromosome 11 · GRCh37 30,252,352 · GRCh38 30,230,805
Studied allele
T
Published statistic
T-allele effect -0.41 IU/liter per allele, additive model P 1.11e-6, N 1,054 (Abstract; Table 2). 2022 validation in infertile men: beta -0.29 (SE 0.06) on Box-Cox FSH, P 5.55e-7; mean FSH GG 5.8, GT 4.6, TT 3.6 IU/l (n 803 / 294 / 26) (Schubert 2022, Table 3) (Table 2, FSH (IU/liter) mean (sd) row; Results)
1000 Genomes Project phase 3, people with 0, 1 and 2 copies
All regions 2107 / 374 / 23 · Africa 601 / 58 / 2 · The Americas 273 / 67 / 7 · East Asia 472 / 32 / 0 · Europe 368 / 126 / 9 · South Asia 393 / 91 / 5
Limits

What it cannot tell you

The association shown here concerns FSH in men. In the cited population cohort, sperm motility and morphology were not associated with this marker, and sperm-count differences were not statistically significant. It does not measure your current FSH or sperm quality, cannot tell whether you can conceive, is not a test for infertility and should not guide fertility treatment. Only the studied G/T allele pair is interpreted.

Genetically Determined Dosage of Follicle-Stimulating Hormone (FSH) Affects Male Reproductive Parameters (Grigorova et al., 2011)
The same topic

More in Reproductive biology

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