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DNA Traits · Reproductive biology

Natural menopause timing, UIMC1 marker

The age at which periods stop naturally.

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Evidence · Replicated

What the research found

In the cited research, the T allele at rs365132 was associated with later age at natural menopause in studied women.

GG
Earlier
GT
Middle
TT
Later
Slight effect

What the study found

In the study, each copy went with age at natural menopause about 0.32 years higher on average.

Women of European descent with natural menopause between 40 and 60, in 21 replication studies · Table 1, rs365132 row (region 5b), Replication line
Evidence
Genome-wide association with independent replication
Who was studied
Women of European descent

The research behind this card was done only in women, so it is part of a report requested as female.

1000 Genomes Project

How common each genotype is

How common each genotype is in the 1000 Genomes Project, by region
RegionGGEarlierGTMiddleTTLater
All regions2,504 people20%42%38%
Africa661 people1%21%78%
The Americas347 people33%46%21%
East Asia504 people25%51%23%
Europe503 people26%50%24%
South Asia489 people26%49%26%

Among the 2,504 people of the 1000 Genomes Project, in five world regions. These percentages describe groups of people, never anyone’s chance of having a trait.

Ancient genomes

Through time

How often the studied letter was read in ancient people, era by era, in the region chosen.

Region
Through time: Europe
Before farmingbefore 6500 BC52%31 of 60 copies read
First farmers6500 to 3000 BC50%227 of 454 copies read
Bronze Age3000 to 1200 BC47%162 of 347 copies read
Iron Age and Antiquity1200 BC to AD 60045%357 of 785 copies read
Middle AgesAD 600 to 150049%469 of 959 copies read
Today1000 Genomes49%491 of 1,006 copies

Neanderthal and Denisovan genomes

Altai Neanderthal
2 copies
Vindija Neanderthal
Not read
Chagyrskaya Neanderthal
Not read
Denisovan
2 copies

Neanderthals and Denisovans carried this letter too: it is the older of the two.

For most ancient people only one of their two copies can be read, so these counts are copies read, not people. Close relatives, repeated samples and samples the archive marks as unreliable are left out. Ancient genomes from the Allen Ancient DNA Resource (AADR v66): 15,136 people.
rs365132

The marker

Gene or region
UIMC1 (RAP80)
Marker
rs365132
Location
Chromosome 5 · GRCh37 176,378,574 · GRCh38 176,951,573
Letters studied
G and T, with T as the studied allele

A DNA Traits report reads this marker in your raw DNA file and shows which of the three genotypes is yours, with how common it is. It counts the copies of the studied allele; it does not measure the trait itself.

Marker
UIMC1 (RAP80) · rs365132
Location
Chromosome 5 · GRCh37 176,378,574 · GRCh38 176,951,573
Studied allele
T
Published statistic
Replication beta +0.319 years per T allele (SE 0.046), P 4.26e-12, T frequency 0.494; discovery +0.275 (SE 0.029), P 1.90e-21; combined +0.287 (SE 0.025), P 9.11e-32 (Stolk 2012 Table 1). He 2009 Table 1 joint +0.39 (SE 0.052) per T, P 8.4e-14; Day 2015 Table 1 -0.24 (SE 0.02) per G, P 1.4e-33 (Table 1, rs365132 row (region 5b), Replication line)
1000 Genomes Project phase 3, people with 0, 1 and 2 copies
All regions 508 / 1045 / 951 · Africa 9 / 137 / 515 · The Americas 115 / 158 / 74 · East Asia 127 / 259 / 118 · Europe 131 / 253 / 119 · South Asia 126 / 238 / 125
See this card in the sample report
Limits

What it cannot tell you

Studied in women of European descent and concerns natural menopause, not menopause after surgery or treatment. A single marker, one of about 290 linked to the age at natural menopause.

Meta-analyses identify 13 loci associated with age at menopause and highlight DNA repair and immune pathways (Stolk et al., 2012)
The same topic

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