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DNA Traits · Body & performance

Adult height association

How tall a person is as an adult.

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Evidence · Replicated

What the research found

In the cited research, the C allele at rs1042725 was associated with greater adult height in the studied cohorts.

TT
Lower average
CT
Middle
CC
Higher average
Slight effect

What the study found

In the study, each copy went with adult height about 0.4 cm higher on average.

European-ancestry adults from four replication studies in the UK and Finland · 19,064 people · Abstract (19,064 adults from four further studies; about 0.4 cm per C allele); Results paragraph on the adult replication studies (0.07 Z-score units, about 0.4 cm); Table 1 (combined replication 0.067, SE 0.010)
Evidence
Genome-wide association with independent replication
Who was studied
European-ancestry discovery and replication cohorts
1000 Genomes Project

How common each genotype is

How common each genotype is in the 1000 Genomes Project, by region
RegionTTLower averageCTMiddleCCHigher average
All regions2,504 people37%42%21%
Africa661 people12%44%45%
The Americas347 people42%45%13%
East Asia504 people68%29%3%
Europe503 people30%48%22%
South Asia489 people46%43%11%

Among the 2,504 people of the 1000 Genomes Project, in five world regions. These percentages describe groups of people, never anyone’s chance of having a trait.

Ancient genomes

Through time

How often the studied letter was read in ancient people, era by era, in the region chosen.

Region
Through time: Europe
Before farmingbefore 6500 BC69%33 of 48 copies read
First farmers6500 to 3000 BC43%279 of 647 copies read
Bronze Age3000 to 1200 BC49%296 of 608 copies read
Iron Age and Antiquity1200 BC to AD 60049%398 of 812 copies read
Middle AgesAD 600 to 150044%228 of 513 copies read
Today1000 Genomes46%466 of 1,006 copies

Neanderthal and Denisovan genomes

Altai Neanderthal
No copies
Vindija Neanderthal
No copies
Chagyrskaya Neanderthal
No copies
Denisovan
No copies
For most ancient people only one of their two copies can be read, so these counts are copies read, not people. Close relatives, repeated samples and samples the archive marks as unreliable are left out. Damage in old DNA can fake this letter, so it is counted only from samples treated to remove that damage and from high-quality genomes. Ancient genomes from the Allen Ancient DNA Resource (AADR v66): 15,136 people.
rs1042725

The marker

Gene or region
HMGA2
Marker
rs1042725
Location
Chromosome 12 · GRCh37 66,358,347 · GRCh38 65,964,567
Letters studied
C and T, with C as the studied allele

A DNA Traits report reads this marker in your raw DNA file and shows which of the three genotypes is yours, with how common it is. It counts the copies of the studied allele; it does not measure the trait itself.

Marker
HMGA2 · rs1042725
Location
Chromosome 12 · GRCh37 66,358,347 · GRCh38 65,964,567
Studied allele
C
Published statistic
0.07 adult height Z-score units per C allele (95% CI 0.05 to 0.09), P 3e-11 in replication (Table 1: 0.067, SE 0.010); all studies 0.074 (SE 0.009), P 4e-16 (Abstract (19,064 adults from four further studies; about 0.4 cm per C allele); Results paragraph on the adult replication studies (0.07 Z-score units, about 0.4 cm); Table 1 (combined replication 0.067, SE 0.010))
1000 Genomes Project phase 3, people with 0, 1 and 2 copies
All regions 937 / 1043 / 524 · Africa 77 / 289 / 295 · The Americas 145 / 157 / 45 · East Asia 341 / 148 / 15 · Europe 150 / 240 / 113 · South Asia 224 / 209 / 56
See this card in the sample report
Limits

What it cannot tell you

The adult replication effect was about 0.4 cm per C allele on average. Height involves many genes and developmental factors. This marker cannot predict your height, a child's final height or response to growth treatment, and it is not a test for a growth disorder.

A common variant of HMGA2 is associated with adult and childhood height in the general population (Weedon et al., 2007)
The same topic

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