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DNA Traits · Sleep & rhythms

Difficulty sleeping association

Trouble falling asleep or staying asleep, as people reported it.

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Evidence · Replicated

What the research found

In the cited research, the T allele at rs113851554 was associated with more frequent difficulty falling asleep or staying asleep in the studied cohorts.

GG
Less often
GT
Middle
TT
More often
Slight effect
Evidence
Replicated association with reported insomnia symptoms
Who was studied
European-ancestry UK Biobank participants, with independent HUNT and Partners Biobank replication
1000 Genomes Project

How common each genotype is

How common each genotype is in the 1000 Genomes Project, by region
RegionGGLess oftenGTMiddleTTMore often
All regions2,504 people96%4%<1%
Africa661 people>99%<1%Not seen
The Americas347 people96%4%Not seen
East Asia504 peopleAllNot seenNot seen
Europe503 people90%10%<1%
South Asia489 people94%6%Not seen

Among the 2,504 people of the 1000 Genomes Project, in five world regions. These percentages describe groups of people, never anyone’s chance of having a trait.

Ancient genomes

Through time

How often the studied letter was read in ancient people, era by era, in the region chosen.

Region
Through time: Europe
Before farmingbefore 6500 BC0%0 of 34 copies read
First farmers6500 to 3000 BC1%3 of 212 copies read
Bronze Age3000 to 1200 BC2%4 of 164 copies read
Iron Age and Antiquity1200 BC to AD 6005%26 of 475 copies read
Middle AgesAD 600 to 15004%18 of 457 copies read
Today1000 Genomes5%53 of 1,006 copies

Neanderthal and Denisovan genomes

Altai Neanderthal
Not read
Vindija Neanderthal
Not read
Chagyrskaya Neanderthal
No copies
Denisovan
Not read
For most ancient people only one of their two copies can be read, so these counts are copies read, not people. Close relatives, repeated samples and samples the archive marks as unreliable are left out. Ancient genomes from the Allen Ancient DNA Resource (AADR v66): 15,136 people.
rs113851554

The marker

Gene or region
MEIS1
Marker
rs113851554
Location
Chromosome 2 · GRCh37 66,750,564 · GRCh38 66,523,432
Letters studied
G and T, with T as the studied allele

A DNA Traits report reads this marker in your raw DNA file and shows which of the three genotypes is yours, with how common it is. It counts the copies of the studied allele; it does not measure the trait itself.

Marker
MEIS1 · rs113851554
Location
Chromosome 2 · GRCh37 66,750,564 · GRCh38 66,523,432
Studied allele
T
Published statistic
OR 1.19 per T allele (95% CI 1.15 to 1.23), P 1.5e-21; MEIS1 replication also reported in HUNT (14,923 cases, 47,610 controls) and Partners Biobank (2,217 cases, 14,240 controls); BUHMBOX with 20 restless-legs SNPs P 4.09e-6 (heterogeneity) (Results)
1000 Genomes Project phase 3, people with 0, 1 and 2 copies
All regions 2405 / 97 / 2 · Africa 655 / 6 / 0 · The Americas 332 / 15 / 0 · East Asia 504 / 0 / 0 · Europe 452 / 49 / 2 · South Asia 462 / 27 / 0
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Limits

What it cannot tell you

This is an association with reported insomnia symptoms; it is not a test for insomnia or a prediction that you will develop it. Part of the signal may reflect restless legs symptoms in people reporting sleep difficulties; the marker is not specific to insomnia. The marker is also used for the separate sleep efficiency association; these are related observations, not two independent genetic signals. It is not a test for restless legs syndrome and does not recommend treatment. Only the studied G/T allele pair is interpreted; A calls are unsupported by this association.

Biological and clinical insights from genetics of insomnia symptoms (Lane et al., 2019)
The same topic

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